tmhmm: Interface to TMHMM

Predicting the topology of membrane proteins is part of the field of computational biology. 'TMHMM' is a program to predict transmembrane helices in proteins. 'TMHMM' can be called from a website and/or locally using Bash. This package allows to install and call TMHMM from R and parse its results.

Version: 1.3
Imports: ggplot2, rappdirs, stringr, tibble
Suggests: curl, testthat (≥ 2.1.0), knitr, rmarkdown
Published: 2020-11-18
Author: Richel J.C. Bilderbeek
Maintainer: Richel J.C. Bilderbeek <richel at richelbilderbeek.nl>
BugReports: https://github.com/richelbilderbeek/tmhmm/issues
License: GPL-3
URL: https://github.com/richelbilderbeek/tmhmm/
NeedsCompilation: no
SystemRequirements: TMHMM (https://services.healthtech.dtu.dk/service.php?TMHMM-2.0)
CRAN checks: tmhmm results

Downloads:

Reference manual: tmhmm.pdf
Vignettes: Predict the Topology of a Membrane Protein
Package source: tmhmm_1.3.tar.gz
Windows binaries: r-devel: tmhmm_1.3.zip, r-release: tmhmm_1.3.zip, r-oldrel: tmhmm_1.3.zip
macOS binaries: r-release: tmhmm_1.3.tgz, r-oldrel: tmhmm_1.3.tgz

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