ttScreening: Genome-Wide DNA Methylation Sites Screening by Use of Training and Testing Samples

A screening process utilizing training and testing samples to filter out uninformative DNA methylation sites. Surrogate variables (SVs) of DNA methylation are included in the filtering process to explain unknown factor effects.

Version: 1.6
Depends: matrixStats, sva, limma
Imports: graphics, stats, corpcor, simsalapar, MASS
Suggests: mvtnorm
Published: 2018-10-11
DOI: 10.32614/CRAN.package.ttScreening
Author: Meredith Ray, Xin Tong, Hongmei Zhang
Maintainer: Meredith Ray <maray at>
License: Artistic-2.0
NeedsCompilation: no
CRAN checks: ttScreening results


Reference manual: ttScreening.pdf


Package source: ttScreening_1.6.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): ttScreening_1.6.tgz, r-oldrel (arm64): ttScreening_1.6.tgz, r-release (x86_64): ttScreening_1.6.tgz, r-oldrel (x86_64): ttScreening_1.6.tgz
Old sources: ttScreening archive


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